Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908443.1_cds_XP_016458574.1_52186
CDS Infomation

[gene=LOC107782223] [db_xref=GeneID:107782223] [protein=probable protein phosphatase 2C 53 isoform X2] [protein_id=XP_016458574.1] [location=join(69174..69770,69872..70189,70267..70372,71228..71562)] [gbkey=CDS]
Sequence

ATGTCGCTTGATGTGATTTCTGAAAATGAAAGCAACTGGATTGCTGGTGATGATGATTCC
TTCTCATTGGAGGGTGATCAGATTCTTGATAGTTCGTGTTCCTTGTCAGTGGTGAGCGAT
TGTAGTAGTATATGCGCTGATGATTTTATAGGTTTTGAGATAGCGTCTGATATAGAAGGT
CAGGATTTCGTAGATTCTCAGAAAATCATTAGCCATGTCGAACTTATTGCTAAGACTGAG
GTTCTAGTAGAGTCAGATGTTGAGGATCCTGTGACTAGACCCGTGGCAGGTTCCGTTGGA
CTTGAGGAGCAGATCTCAAAATCATCTGCAGTTGTAGTTCAGCTACCCTTAGATAAAGGC
TTGAGTGCAACAGTCAGCCGAAGTGTTTTTGAAGTGGACTACATACCTCTATGGGGATAT
ACATCTATCTGTGGAAGGAGGCCAGAAATGGAAGATGCATTTGCAACTGTTCCTAGATTC
TTGAAAATTCCTCTGCAGATGCTAATTGGTGATCGTGTGCTTGATGGACAGCCTAGACGC
TTAAGTCATTTGACGACTCATTTCTTTGGAGTTTATGATGGCCATGGTGGTTCTCAGGTG
GCAAATTACTGCCGAGACCAGATGCATGCTGTATTGACTGAGGAGCTGGAAACTATTATG
ATAAATCTCAGTGATGAAAGTATTAGGCAAAGTTGCCAAGAACTCTGGAGAAAAGCATTT
ACCAACTGTTTTCTTAAAGTTGATGCTGAAATCGCAGGTGGGACTAGTCATGAGCCTGTT
GCCCCAGAAACTGTAGGCTCCACAGCCGTTGTTGCCATTGTTTGTTCATCTCACATTATA
GTGTCAAACTGTGGTGATTCAAGGGCTGTTCTGTGTCGTGGAAAGGAACCCTTGGCATTG
TCAGTGGATCACAAACCAAACCGAGAAGATGAATATGAAAGGATTGAAGCAGCTGGAGGC
AAGGTGATACAGTGGAATGGCCATCGTGTTTTTGGTGTTCTTGCAATGTCTAGGTCCATC
GGAGATAGATACTTGAAGCCTTGGATTATTCCTGATCCAGAAGTAACGTTCATACCTCGA
GCCAAGGATGACGAATGCCTTATACTTGCGAGTGATGGTTTATGGGATGTCATGACAAAT
GAAGAAGTTTGTGATATGGCTCGTAAACGCATACTTATGTGGCATAAAAAGAACAGTGTA
ACGCTCCCCATGGAAAGGGGTGAAGGAATTGATCCAGCAGCACAGGCTGCAGCAGAGTGT
TTGTCGAATCGAGCTCTTCAAAAGGGCAGCAAGGACAACATAACTGTGATTGTGGTGGAC
TTGAAAGCCCAAAGAAAGTTTAAGAGCAAAACCTAA

Peptide Sequence

PEP ID

XP_016458574.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 53 isoform X2 [Nicotiana tabacum]
Sequence

MSLDVISENESNWIAGDDDSFSLEGDQILDSSCSLSVVSDCSSICADDFIGFEIASDIEG
QDFVDSQKIISHVELIAKTEVLVESDVEDPVTRPVAGSVGLEEQISKSSAVVVQLPLDKG
LSATVSRSVFEVDYIPLWGYTSICGRRPEMEDAFATVPRFLKIPLQMLIGDRVLDGQPRR
LSHLTTHFFGVYDGHGGSQVANYCRDQMHAVLTEELETIMINLSDESIRQSCQELWRKAF
TNCFLKVDAEIAGGTSHEPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPLAL
SVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFIPR
AKDDECLILASDGLWDVMTNEEVCDMARKRILMWHKKNSVTLPMERGEGIDPAAQAAAEC
LSNRALQKGSKDNITVIVVDLKAQRKFKSKT

Transcript Sequence

Gene sequence data has not been registered.